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Structured Data for Plane-Wave Pseudopotential Method

Below, the user can find an example JSON structured representation for the Plane-wave Pseudopotential Method.

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{
    "schemaId": "methods-directory-pseudopotential", 
    "allOf": [
        {
            "schemaId": "method", 
            "required": [
                "type", 
                "subtype"
            ], 
            "properties": {
                "subtype": {
                    "type": "string", 
                    "description": "general subtype of this method, eg. `ultra-soft`"
                }, 
                "type": {
                    "type": "string", 
                    "description": "general type of this method, eg. `pseudopotential`"
                }, 
                "precision": {
                    "type": "object", 
                    "description": "Object showing the actual possible precision based on theory and implementation"
                }, 
                "data": {
                    "type": "object", 
                    "description": "additional data specific to method, eg. array of pseudopotentials"
                }
            }, 
            "title": "method schema (base)"
        }
    ], 
    "properties": {
        "subtype": {
            "enum": [
                "us", 
                "nc", 
                "paw"
            ]
        }, 
        "type": {
            "enum": [
                "pseudopotential"
            ]
        }, 
        "precision": {
            "schemaId": "methods-directory-pseudopotential-precision", 
            "required": [
                "ecutwfc", 
                "ecutrho", 
                "kgrid"
            ], 
            "properties": {
                "kgrid": {
                    "properties": {
                        "ibz": {
                            "type": "integer", 
                            "description": "number of k-points inside irreducible wedge of the Brillouin zone"
                        }
                    }, 
                    "description": "information about kpoints grid", 
                    "allOf": [
                        {
                            "schemaId": "core-abstract-3d-grid", 
                            "required": [
                                "dimensions", 
                                "shifts"
                            ], 
                            "properties": {
                                "shifts": {
                                    "title": "array of 3 number elements schema", 
                                    "minItems": 3, 
                                    "items": {
                                        "type": "number"
                                    }, 
                                    "schemaId": "core-primitive-array-of-3-numbers", 
                                    "maxItems": 3, 
                                    "type": "array"
                                }, 
                                "dimensions": {
                                    "title": "array of 3 number elements schema", 
                                    "minItems": 3, 
                                    "items": {
                                        "type": "number"
                                    }, 
                                    "schemaId": "core-primitive-array-of-3-numbers", 
                                    "maxItems": 3, 
                                    "type": "array"
                                }
                            }, 
                            "title": "3 dimensional grid schema"
                        }
                    ]
                }, 
                "ecutwfc": {
                    "type": "number", 
                    "description": "wavefunction cutoff energy in eV"
                }, 
                "ecutrho": {
                    "type": "number", 
                    "description": "charge density cutoff energy in eV"
                }
            }, 
            "title": "precision schema for pseudopotential dft"
        }, 
        "data": {
            "properties": {
                "dateSet": {
                    "schemaId": "methods-directory-pseudopotential-dataset", 
                    "required": [
                        "apps", 
                        "elements", 
                        "exchangeCorrelation", 
                        "format", 
                        "name", 
                        "type", 
                        "files"
                    ], 
                    "properties": {
                        "files": {
                            "items": {
                                "schemaId": "methods-directory-pseudopotential-file", 
                                "required": [
                                    "element", 
                                    "type", 
                                    "exchangeCorrelation", 
                                    "source", 
                                    "path", 
                                    "apps"
                                ], 
                                "properties": {
                                    "valenceElectrons": {
                                        "type": "integer"
                                    }, 
                                    "title": {
                                        "type": "string"
                                    }, 
                                    "generationDate": {
                                        "type": "string"
                                    }, 
                                    "storage": {
                                        "type": "object", 
                                        "properties": {
                                            "url": {
                                                "type": "string", 
                                                "description": "pseudopotential file path on a cloud storage"
                                            }, 
                                            "container": {
                                                "type": "string", 
                                                "description": "container name where pseudo file is uploaded"
                                            }, 
                                            "provider": {
                                                "enum": [
                                                    "ec2", 
                                                    "softlayer", 
                                                    "azure", 
                                                    "rackspace"
                                                ], 
                                                "type": "string", 
                                                "description": "cloud storage provider where pseudo file is stored"
                                            }
                                        }
                                    }, 
                                    "textHeading": {
                                        "type": "string", 
                                        "description": "text of pseudopotential file header"
                                    }, 
                                    "electronicConfiguration": {
                                        "type": "string"
                                    }, 
                                    "apps": {
                                        "type": "array", 
                                        "description": "simulation engines that can use this pseudopotential"
                                    }, 
                                    "element": {
                                        "type": "string", 
                                        "description": "chemical element"
                                    }, 
                                    "source": {
                                        "type": "string", 
                                        "description": "explains where this came from"
                                    }, 
                                    "radii": {
                                        "schemaId": "methods-directory-pseudopotential-file-radii", 
                                        "type": "object", 
                                        "description": "cutoff and atomic radii of the elemental pseudopotential", 
                                        "properties": {
                                            "units": {
                                                "enum": [
                                                    "angstrom", 
                                                    "bohr", 
                                                    "nm"
                                                ]
                                            }, 
                                            "cutoff": {
                                                "type": "number"
                                            }, 
                                            "wignerSeitz": {
                                                "type": "number"
                                            }, 
                                            "partialCore": {
                                                "type": "number"
                                            }
                                        }, 
                                        "title": "radii schema"
                                    }, 
                                    "version": {
                                        "type": "string", 
                                        "description": "explains the version of where this came from"
                                    }, 
                                    "mass": {
                                        "type": "number", 
                                        "description": "atomic mass in amu"
                                    }, 
                                    "screening": {
                                        "enum": [
                                            "linear", 
                                            "non_linear", 
                                            "none"
                                        ], 
                                        "type": "string"
                                    }, 
                                    "energyCutoff": {
                                        "schemaId": "methods-directory-pseudopotential-file-energy-cutoff", 
                                        "type": "object", 
                                        "properties": {
                                            "energyCutoff": {
                                                "type": "object", 
                                                "description": "highest energy of plane waves included in calculation", 
                                                "properties": {
                                                    "units": {
                                                        "enum": [
                                                            "eV", 
                                                            "rydberg", 
                                                            "hartree"
                                                        ]
                                                    }, 
                                                    "max": {
                                                        "type": "number"
                                                    }, 
                                                    "min": {
                                                        "type": "number"
                                                    }
                                                }
                                            }
                                        }, 
                                        "title": "energy cutoff schema"
                                    }, 
                                    "coreStates": {
                                        "enum": [
                                            "all", 
                                            "none", 
                                            "partial"
                                        ], 
                                        "type": "string"
                                    }, 
                                    "path": {
                                        "type": "string", 
                                        "description": "location of the pseudopotential file on filesystem"
                                    }, 
                                    "type": {
                                        "enum": [
                                            "paw", 
                                            "us", 
                                            "nc"
                                        ], 
                                        "type": "string", 
                                        "description": "type of pseudization"
                                    }, 
                                    "properties": {
                                        "type": "array", 
                                        "description": "array of characteristic properties"
                                    }, 
                                    "exchangeCorrelation": {
                                        "schemaId": "methods-directory-pseudopotential-file-exchange-correlation", 
                                        "type": "object", 
                                        "description": "details on the type of formalism used", 
                                        "properties": {
                                            "approximation": {
                                                "enum": [
                                                    "lda", 
                                                    "gga"
                                                ]
                                            }, 
                                            "functional": {
                                                "type": "string"
                                            }
                                        }, 
                                        "title": "exchange correlation schema"
                                    }
                                }, 
                                "title": "pseudopotential file schema"
                            }, 
                            "type": "array", 
                            "description": "pseudopotentials used inside this set"
                        }, 
                        "elements": {
                            "items": {
                                "type": "string"
                            }, 
                            "type": "array", 
                            "description": "chemical elements for which files are present in the set"
                        }, 
                        "name": {
                            "type": "string"
                        }, 
                        "format": {
                            "enum": [
                                "upf", 
                                "vasp"
                            ], 
                            "type": "string", 
                            "description": "type of pseudopotantial format"
                        }, 
                        "apps": {
                            "type": "array", 
                            "description": "simulation engines that can use this pseudopotential set items"
                        }, 
                        "source": {
                            "enum": [
                                "quantum espresso database", 
                                "gbrv", 
                                "vasp database", 
                                "other"
                            ], 
                            "type": "string", 
                            "description": "explains the source of where this came from"
                        }, 
                        "version": {
                            "type": "string", 
                            "description": "explains the version of where this came from"
                        }, 
                        "type": {
                            "enum": [
                                "paw", 
                                "us", 
                                "nc"
                            ], 
                            "type": "string", 
                            "description": "type of pseudization"
                        }, 
                        "exchangeCorrelation": {
                            "schemaId": "methods-directory-pseudopotential-file-exchange-correlation", 
                            "type": "object", 
                            "description": "details on the type of formalism used", 
                            "properties": {
                                "approximation": {
                                    "enum": [
                                        "lda", 
                                        "gga"
                                    ]
                                }, 
                                "functional": {
                                    "type": "string"
                                }
                            }, 
                            "title": "exchange correlation schema"
                        }
                    }, 
                    "title": "pseudopotential dataset schema"
                }
            }
        }
    }, 
    "$schema": "http://json-schema.org/draft-04/schema#", 
    "title": "pseudopotential method schema"
}
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{
    "subtype": "us", 
    "data": {
        "searchText": "", 
        "pseudo": [
            {
                "files": [
                    {
                        "valenceElectrons": 4, 
                        "name": "pseudopotential file", 
                        "electronicConfiguration": "s2p2", 
                        "generationDate": "05Jan2001", 
                        "textHeading": "PAW_PBE Si 05Jan2001\n   4.00000000000000\nparameters from PSCTR are:\n   VRHFIN =Si: s2p2\n   LEXCH  = PE\n   EATOM  =   103.0669 eV,    7.5752 Ry\n \n   TITEL  = PAW_PBE Si 05Jan2001\n   LULTRA =        F    use ultrasoft PP ?\n   IUNSCR =        1    unscreen: 0-lin 1-nonlin 2-no\n   RPACOR =    1.500    partial core radius\n   POMASS =   28.085; ZVAL   =    4.000    mass and valenz\n   RCORE  =    1.900    outmost cutoff radius\n   RWIGS  =    2.480; RWIGS  =    1.312    wigner-seitz radius (au A)\n   ENMAX  =  245.345; ENMIN  =  184.009 eV\n   ICORE  =        2    local potential\n   LCOR   =        T    correct aug charges\n   LPAW   =        T    paw PP\n   EAUG   =  322.069\n   DEXC   =    0.000\n   RMAX   =    1.950    core radius for proj-oper\n   RAUG   =    1.300    factor for augmentation sphere\n   RDEP   =    1.993    radius for radial grids\n   RDEPT  =    1.837    core radius for aug-charge\n \n   Atomic configuration\n    6 entries     n  l   j            E        occ.\n     1  0  0.50     -1785.8828   2.0000\n     2  0  0.50      -139.4969   2.0000\n     2  1  1.50       -95.5546   6.0000\n     3  0  0.50       -10.8127   2.0000\n     3  1  0.50        -4.0811   2.0000\n     3  2  1.50        -4.0817   0.0000\n   Description\n     l       E           TYP  RCUT    TYP  RCUT\n     0    -10.8127223     23  1.900\n     0     -7.6451159     23  1.900\n     1     -4.0811372     23  1.900\n     1      2.4879257     23  1.900\n     2     -4.0817478      7  1.900\n   Error from kinetic energy argument (eV)\n", 
                        "title": "Si paw pbe vasp 5.2", 
                        "apps": [
                            "vasp"
                        ], 
                        "element": "Si", 
                        "source": "vasp", 
                        "radii": {
                            "units": "angstrom", 
                            "cutoff": 1.9, 
                            "wignerSeitz": 1.312, 
                            "name": "radii", 
                            "partialCore": 1.5
                        }, 
                        "mass": 28.085, 
                        "energyCutoff": {
                            "units": "eV", 
                            "max": 245.345, 
                            "name": "energy cutoff", 
                            "min": 184.009
                        }, 
                        "path": "/export/share/pseudo/ag/gga/pbe/gbrv/1.4/us/ag_pbe_gbrv_1.4.upf", 
                        "type": "paw", 
                        "exchangeCorrelation": {
                            "approximation": "gga", 
                            "functional": "pbe"
                        }
                    }
                ], 
                "elements": [
                    "Si", 
                    "Ge", 
                    "As"
                ], 
                "name": "my set", 
                "format": "upf", 
                "apps": [
                    "espresso"
                ], 
                "source": "gbrv", 
                "version": "1.5", 
                "type": "us", 
                "exchangeCorrelation": {
                    "approximation": "gga", 
                    "functional": "pbe"
                }
            }
        ]
    }, 
    "type": "pseudopotential"
}